Data Scientist for Cardiac Proteomics & System Biology Group

Job portal All vacanciesData Scientist for Cardiac Proteomics & System Biology GroupAre you passionate about data science and eager to apply your skills to cutting-edge biomedical research? We are looking for a highly motivated and independent Data Scientist to join our dynamic research group and contribute to the analysis of proteomics datasets in the context of cardiac disease. Your roles will span across research projects within our team.About UsOur research group investigates the molecular mechanisms underlying cardiac pathology, with a particular focus on proteins and cells involved in disease progression. We work at the intersection of cardiac proteomics, systems biology and molecular cardiology, and our projects are deeply collaborative spanning national and international academic research groups and clinical collaborators.We foster a diverse and international team culture, where curiosity, creativity, drive and scientific rigor are valued. Our group is embedded at the Department of Biomedical Sciences, University of Copenhagen with a fabulous location in the Mærsk Tower at the Panum Institute.Your RoleAs our new Data Scientist, you will play a central role in analyzing proteomics data generated across multiple projects. You will work closely with experimentalists in our team to extract meaningful biological insights from complex datasets.Your Key Responsibilities Will IncludePerforming quality control and in-depth analysis of mass spectrometry-based proteomics dataLeading data analysis across diverse projects, including:Large-scale cardiac tissue proteomics from patient cohortsPhosphoproteomics and protein interaction studiesSingle-cell proteomicsDeveloping and applying computational methods for functional interpretation of proteomics dataExploring and implementing novel analytical approaches to enhance data interpretationTranslating data into biological insights relevant to heart diseaseCommunicating scientific findings clearly in writing and contributing to publicationsSupporting lab members with data-related questions and contributing to lab management when neededYour ProfileWe are looking for a data scientist who is not only technically skilled but also scientifically curious and collaborative.Essential QualificationsHands-on experience with mass spectrometry-based proteomicsUnderstanding of different data acquisition modes (particularly DIA), including associated search strategies and quality control proceduresFamiliarity with software frameworks such as DIA-NN, FragPipe, or comparable platformsProficiency in at least one programming language, preferably R and/or PythonDemonstrated experience with state-of-the-art tools for the analysis of complex MS datasets, such as those derived from enrichment workflows or multi-batch experimental designsStrong interest in understanding the structure and nuances of proteomics dataEagerness to explore and evaluate new analytical strategiesExcellent communication skills in English, both written and spokenDesirable QualificationsPhD in a quantitative discipline (e.g., bioinformatics, computational biology, data science, or related fields). Or M.Sc.Experience with functional annotation and biological interpretation of proteomics dataCollegial, proactive, and supportive team playerPrevious involvement in ambitious research environmentYou will be expected to contribute to the ongoing research projects in the group on an ad hoc basis when needed; disseminate your expertise to new lab members and support the lab management.What We OfferA stimulating and collaborative research environmentAccess to state-of-the-art proteomics datasets and infrastructureOpportunities to work with leading scientists in molecular cardiology and cardiac proteomicsA workplace that values diversity, creativity, and scientific excellenceOutstanding facilitiesPlace of employmentThe place of employment is at the Cardiac Proteomics & Systems Biology Group, Department of Biomedical Sciences, University of Copenhagen.We offer creative and stimulating working conditions in dynamic and international research environment.Terms of employmentFull-time position (37 hours/week). Fixed-term contract for 3 years.Starting date: February 1, 2026 (or as agreed). Workplace: Cardiac Proteomics & Systems Biology Group, Department of Biomedical Sciences, University of Copenhagen. Employment will be in accordance with the provisions of the collective agreement between the Danish Ministry of Taxation and AC (the Danish Confederation of Professional Associations). The monthly salary will be based on the number of years of work experience (seniority) with the possibility to negotiate a salary supplement based on prior experiences and qualifications. The employer will pay an additional 18.07 % to your pension fund.QuestionsFor further information regarding the position, please contact Professor Alicia Lundby, Alicia.lundby@sund.ku.dk.ApplicationYour Application Should In (English/Danish) IncludeLetter of application addressing the requirements (max. one page).Curriculum VitaeA certified/signed copy of certificate(s) of educationPlease submit your application by clicking on “Apply Now” below. Only online applications will be accepted.Application deadline: 7 December 2025, 23.59 CETWe reserve the right not to consider material received after the deadline, and not to consider applications that do not live up to the abovementioned requirements.Interviews are expected to be held in the weeks following the application deadline.The University of Copenhagen wish to reflect the diversity of society and encourage all qualified candidates to apply regardless of personal background.APPLY NOWPart of the International Alliance of Research Universities (IARU), and among Europe’s top-ranking universities, the University of Copenhagen promotes research and teaching of the highest international standard. Rich in tradition and modern in outlook, the University gives students and staff the opportunity to cultivate their talent in an ambitious and informal environment. An effective organisation – with good working conditions and a collaborative work culture – creates the ideal framework for a successful academic career.ContactAlicia LundbyE-mail: hpd299@ku.dkInfoApplication deadline: 07-12-2025Employment start: 01-02-2026Working hours: Full timeDepartment/Location: Department of Biomedical SciencesSearch all vacancies